All but one of the atlas skewers appear. The one on the confluence tree triad. I've abandoned, tried all characters, nothing.
Anyone else having this issue?
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Having zoned in from the Garden, the skew at the trees at first didn’t spawn for me either. I assumed it must be someplace else so I grabbed the other two in the Confluence, then doubled back before I moved on to the Chapel area and it ended up spawning. So you might try heading to the Confluence and running back and forth between the various spawn points for the skews to see if it suddenly appears. (΄◉◞౪◟◉`)