You listed this under "Balance Issues" which is very weird considering the system is put in place to promote primary weapons and of course a better player will score more kills with primaries, than players who just know how to run in with a shotgun or cheese kills with any other special ammo weapon.
Are you going to tie special ammo generation to K/D next? How much lower does the skill ceiling need to sink?
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The PvP impaired should definitely get more special than sweaty try hards