I often get teamed up with AFKers who shoots couple mobs then just hides the rest of the time. Seconded by AFKers who keep killing himself by running into mobs or bosses. I rarely see a pure AFKer now.
Nonetheless, whenever I see any of the behavior above, I just report them and go to orbit. Usually the next team is willing to play the strike like normal players.
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In PvE I very rarely run into a AFK person. However, if I do run into them I use my baby Titan melee to hopefully knock them out of it. In PvP there's usually 2 people: The one who's completely inactive (sorta-rare) and the one who's AFK for 30 seconds and then jumps into the fight (common).