I made a post the other day stating that Iron Banner and PvP quests were not registering kills properly and it seems that the problem is also present with bounties (at least Gunsmith bounties). I have gotten dozens of kills with both Rocket Launcher and Sniper Rifle for the daily Gunsmith bounties, but most of them are not registering at all. This is extremely frustrating and just adds to the mounting issues with this game right now. Please fix ASAP.
*edit for further context* I was in the public event on Mercury when this was happening, if that's relevant.
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Clearing the console cache by powering down and leaving the hardware unplugged for at least 5 minutes, or verifying the game files via Steam, can help correct these kinds of issues. If it does not, you'll need to wait for Bungie to deploy a fix. https://www.bungie.net/en/Help/Article/12539