Personally, I don't like this new loadout system where the same model of a weapon like some pulse or auto rifle is in another slot just because it has an elemental mod installed. Doesn't seem like it makes much difference in PvP when it comes to damage, but all those other elemental weapons that actually do more damage are all stacked in one slot now (heavy, snipers, shotguns etc.). It's confusing, underwhelming and is a plain worse design choice than it was in D1.
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I'm not a fan of the new loadout system. Two primaries in PvP is pretty functional but in PvE it's terrible. I don't play this game for PvP I play it for PvE.